Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Gm44771-201ENSMUST00000206975 626 ntBASIC15.48■□□□□ 0.07
Pif1Q80SX8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pif1Q80SX8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pif1Q80SX8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.47■□□□□ 0.07
Pif1Q80SX8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pif1Q80SX8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pif1Q80SX8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.46■□□□□ 0.07
Pif1Q80SX8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Pif1Q80SX8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pif1Q80SX8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pif1Q80SX8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Mzt1-203ENSMUST00000227948 952 ntBASIC15.45■□□□□ 0.06
Pif1Q80SX8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pif1Q80SX8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pif1Q80SX8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pif1Q80SX8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms