Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Mir6982-201ENSMUST00000184354 68 ntBASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sh3d21Q7TSG5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sh3d21Q7TSG5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Sh3d21Q7TSG5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sh3d21Q7TSG5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sh3d21Q7TSG5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sh3d21Q7TSG5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sh3d21Q7TSG5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Gm27000-201ENSMUST00000182943 842 ntBASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sh3d21Q7TSG5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sh3d21Q7TSG5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms