Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Gm18032-201ENSMUST00000222541 538 ntBASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf139Q7TMV1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Phf7-203ENSMUST00000226565 1971 ntBASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf139Q7TMV1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Gm22697-201ENSMUST00000175194 63 ntBASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Gm18101-201ENSMUST00000215769 548 ntBASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf139Q7TMV1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Gm26039-201ENSMUST00000158152 144 ntBASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf139Q7TMV1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Rnf139Q7TMV1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Gm13836-201ENSMUST00000121159 501 ntBASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf139Q7TMV1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf139Q7TMV1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf139Q7TMV1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf139Q7TMV1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.94■□□□□ 0.46
Rnf139Q7TMV1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf139Q7TMV1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms