Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Idnk-204ENSMUST00000226010 1898 ntBASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf220Q6PDX6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf220Q6PDX6 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Gm6420-201ENSMUST00000193885 723 ntBASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf220Q6PDX6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rnf220Q6PDX6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rnf220Q6PDX6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rnf220Q6PDX6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Rnf220Q6PDX6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.96■□□□□ 0.14
Rnf220Q6PDX6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Rnf220Q6PDX6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Nespas-201ENSMUST00000143738 1083 ntBASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf220Q6PDX6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rnf220Q6PDX6 Gm10033-202ENSMUST00000211874 928 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms