Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Notch3Q61982 Gm27389-201ENSMUST00000183622 195 ntBASIC12.89□□□□□ -0.35
Notch3Q61982 Il3ra-202ENSMUST00000223589 738 ntBASIC12.89□□□□□ -0.35
Notch3Q61982 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Notch3Q61982 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Notch3Q61982 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.89□□□□□ -0.35
Notch3Q61982 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Gm6443-201ENSMUST00000203599 874 ntBASIC12.89□□□□□ -0.35
Notch3Q61982 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.89□□□□□ -0.35
Notch3Q61982 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Notch3Q61982 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Notch3Q61982 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Notch3Q61982 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.88□□□□□ -0.35
Notch3Q61982 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.88□□□□□ -0.35
Notch3Q61982 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.88□□□□□ -0.35
Notch3Q61982 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Notch3Q61982 Gm18115-201ENSMUST00000221209 621 ntBASIC12.88□□□□□ -0.35
Notch3Q61982 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Notch3Q61982 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Notch3Q61982 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Notch3Q61982 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Notch3Q61982 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Gm11355-201ENSMUST00000121120 306 ntBASIC12.88□□□□□ -0.35
Notch3Q61982 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Notch3Q61982 Gm18958-201ENSMUST00000174258 762 ntBASIC12.88□□□□□ -0.35
Notch3Q61982 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.88□□□□□ -0.35
Notch3Q61982 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Notch3Q61982 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Notch3Q61982 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Notch3Q61982 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Notch3Q61982 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Gm34391-201ENSMUST00000203706 907 ntBASIC12.87□□□□□ -0.35
Notch3Q61982 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Mzt1-203ENSMUST00000227948 952 ntBASIC12.87□□□□□ -0.35
Notch3Q61982 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Notch3Q61982 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Notch3Q61982 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Notch3Q61982 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.86□□□□□ -0.35
Notch3Q61982 Mir3081-201ENSMUST00000175305 84 ntBASIC12.86□□□□□ -0.35
Notch3Q61982 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Notch3Q61982 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms