Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Gm26039-201ENSMUST00000158152 144 ntBASIC16.97■□□□□ 0.31
Six4Q61321 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.97■□□□□ 0.31
Six4Q61321 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.97■□□□□ 0.31
Six4Q61321 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Six4Q61321 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Six4Q61321 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Six4Q61321 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Six4Q61321 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Six4Q61321 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Six4Q61321 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Six4Q61321 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six4Q61321 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six4Q61321 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six4Q61321 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six4Q61321 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six4Q61321 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Six4Q61321 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six4Q61321 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Six4Q61321 Gm18101-201ENSMUST00000215769 548 ntBASIC16.96■□□□□ 0.31
Six4Q61321 Gm21559-201ENSMUST00000220638 855 ntBASIC16.96■□□□□ 0.31
Six4Q61321 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six4Q61321 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six4Q61321 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six4Q61321 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Six4Q61321 Gm8587-201ENSMUST00000076538 843 ntBASIC16.96■□□□□ 0.31
Six4Q61321 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.96■□□□□ 0.31
Six4Q61321 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six4Q61321 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Six4Q61321 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Six4Q61321 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Six4Q61321 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Six4Q61321 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Six4Q61321 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Six4Q61321 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Six4Q61321 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Six4Q61321 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.95■□□□□ 0.3
Six4Q61321 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Six4Q61321 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.95■□□□□ 0.3
Six4Q61321 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.95■□□□□ 0.3
Six4Q61321 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.95■□□□□ 0.3
Six4Q61321 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Six4Q61321 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.94■□□□□ 0.3
Six4Q61321 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Six4Q61321 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.94■□□□□ 0.3
Six4Q61321 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Six4Q61321 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Six4Q61321 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.93■□□□□ 0.3
Six4Q61321 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Six4Q61321 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Six4Q61321 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Six4Q61321 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms