Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Gm18206-201ENSMUST00000207027 926 ntBASIC18.41■□□□□ 0.54
Cln3Q61124 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cln3Q61124 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.41■□□□□ 0.54
Cln3Q61124 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.4■□□□□ 0.54
Cln3Q61124 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cln3Q61124 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.4■□□□□ 0.54
Cln3Q61124 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Cln3Q61124 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.4■□□□□ 0.54
Cln3Q61124 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.4■□□□□ 0.54
Cln3Q61124 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.4■□□□□ 0.54
Cln3Q61124 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cln3Q61124 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.4■□□□□ 0.54
Cln3Q61124 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln3Q61124 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cln3Q61124 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cln3Q61124 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.39■□□□□ 0.53
Cln3Q61124 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cln3Q61124 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cln3Q61124 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cln3Q61124 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.39■□□□□ 0.53
Cln3Q61124 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cln3Q61124 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cln3Q61124 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cln3Q61124 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cln3Q61124 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cln3Q61124 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cln3Q61124 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cln3Q61124 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cln3Q61124 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cln3Q61124 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cln3Q61124 Mir5131-201ENSMUST00000175426 93 ntBASIC18.38■□□□□ 0.53
Cln3Q61124 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.38■□□□□ 0.53
Cln3Q61124 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.38■□□□□ 0.53
Cln3Q61124 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.38■□□□□ 0.53
Cln3Q61124 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cln3Q61124 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln3Q61124 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cln3Q61124 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cln3Q61124 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln3Q61124 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln3Q61124 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln3Q61124 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln3Q61124 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln3Q61124 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln3Q61124 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln3Q61124 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln3Q61124 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.37■□□□□ 0.53
Cln3Q61124 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Cln3Q61124 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.37■□□□□ 0.53
Cln3Q61124 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.37■□□□□ 0.53
Cln3Q61124 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cln3Q61124 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.37■□□□□ 0.53
Cln3Q61124 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cln3Q61124 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln3Q61124 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cln3Q61124 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cln3Q61124 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.36■□□□□ 0.53
Cln3Q61124 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms