Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.65■□□□□ 0.74
Prdm1Q60636 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.65■□□□□ 0.74
Prdm1Q60636 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Prdm1Q60636 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prdm1Q60636 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prdm1Q60636 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Prdm1Q60636 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.64■□□□□ 0.74
Prdm1Q60636 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm1Q60636 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm1Q60636 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm1Q60636 Gm26039-201ENSMUST00000158152 144 ntBASIC19.64■□□□□ 0.73
Prdm1Q60636 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm1Q60636 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Prdm1Q60636 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm1Q60636 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm1Q60636 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Prdm1Q60636 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm1Q60636 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm1Q60636 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prdm1Q60636 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Prdm1Q60636 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm1Q60636 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm1Q60636 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Prdm1Q60636 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm1Q60636 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm1Q60636 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm1Q60636 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Prdm1Q60636 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm1Q60636 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.63■□□□□ 0.73
Prdm1Q60636 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm1Q60636 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm1Q60636 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm1Q60636 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm1Q60636 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prdm1Q60636 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Prdm1Q60636 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Prdm1Q60636 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm1Q60636 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm1Q60636 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm1Q60636 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Prdm1Q60636 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Prdm1Q60636 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Prdm1Q60636 Gm13186-201ENSMUST00000118031 316 ntBASIC19.62■□□□□ 0.73
Prdm1Q60636 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm1Q60636 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.62■□□□□ 0.73
Prdm1Q60636 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm1Q60636 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.62■□□□□ 0.73
Prdm1Q60636 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm1Q60636 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm1Q60636 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm1Q60636 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prdm1Q60636 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.61■□□□□ 0.73
Prdm1Q60636 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Prdm1Q60636 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.61■□□□□ 0.73
Prdm1Q60636 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Prdm1Q60636 Gm10013-201ENSMUST00000106074 672 ntBASIC19.61■□□□□ 0.73
Prdm1Q60636 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Prdm1Q60636 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.61■□□□□ 0.73
Prdm1Q60636 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prdm1Q60636 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prdm1Q60636 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prdm1Q60636 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prdm1Q60636 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Prdm1Q60636 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prdm1Q60636 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prdm1Q60636 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Prdm1Q60636 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.6■□□□□ 0.73
Prdm1Q60636 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prdm1Q60636 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prdm1Q60636 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prdm1Q60636 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms