Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Satb1Q60611 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Satb1Q60611 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.39■□□□□ 0.37
Satb1Q60611 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Satb1Q60611 Mir770-201ENSMUST00000103252 94 ntBASIC17.39■□□□□ 0.37
Satb1Q60611 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Satb1Q60611 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
Satb1Q60611 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.39■□□□□ 0.37
Satb1Q60611 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Satb1Q60611 Gm26039-201ENSMUST00000158152 144 ntBASIC17.39■□□□□ 0.37
Satb1Q60611 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Satb1Q60611 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.39■□□□□ 0.37
Satb1Q60611 Gm2213-201ENSMUST00000197485 688 ntBASIC17.39■□□□□ 0.37
Satb1Q60611 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.39■□□□□ 0.37
Satb1Q60611 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Satb1Q60611 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Satb1Q60611 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Satb1Q60611 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Satb1Q60611 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Satb1Q60611 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.39■□□□□ 0.37
Satb1Q60611 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Satb1Q60611 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Satb1Q60611 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Satb1Q60611 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Satb1Q60611 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.38■□□□□ 0.37
Satb1Q60611 Gm10052-201ENSMUST00000168019 960 ntBASIC17.38■□□□□ 0.37
Satb1Q60611 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.38■□□□□ 0.37
Satb1Q60611 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.38■□□□□ 0.37
Satb1Q60611 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Gm7729-201ENSMUST00000050143 801 ntBASIC17.38■□□□□ 0.37
Satb1Q60611 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Satb1Q60611 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Satb1Q60611 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Satb1Q60611 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.37■□□□□ 0.37
Satb1Q60611 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 Gm11594-201ENSMUST00000122313 162 ntBASIC17.37■□□□□ 0.37
Satb1Q60611 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.37■□□□□ 0.37
Satb1Q60611 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.37■□□□□ 0.37
Satb1Q60611 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.37■□□□□ 0.37
Satb1Q60611 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.37■□□□□ 0.37
Satb1Q60611 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Satb1Q60611 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Satb1Q60611 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.36■□□□□ 0.37
Satb1Q60611 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Satb1Q60611 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Satb1Q60611 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Satb1Q60611 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Satb1Q60611 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Satb1Q60611 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Satb1Q60611 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Satb1Q60611 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Satb1Q60611 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Satb1Q60611 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Satb1Q60611 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Satb1Q60611 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Satb1Q60611 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.35■□□□□ 0.37
Satb1Q60611 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Satb1Q60611 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.35■□□□□ 0.37
Satb1Q60611 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Satb1Q60611 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.35■□□□□ 0.37
Satb1Q60611 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Satb1Q60611 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Satb1Q60611 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Satb1Q60611 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Satb1Q60611 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Satb1Q60611 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Satb1Q60611 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Satb1Q60611 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Satb1Q60611 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Satb1Q60611 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Satb1Q60611 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Satb1Q60611 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Satb1Q60611 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms