Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubr3Q5U430 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubr3Q5U430 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.4■□□□□ 0.86
Ubr3Q5U430 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubr3Q5U430 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.4■□□□□ 0.86
Ubr3Q5U430 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.4■□□□□ 0.86
Ubr3Q5U430 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubr3Q5U430 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ubr3Q5U430 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubr3Q5U430 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubr3Q5U430 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubr3Q5U430 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.4■□□□□ 0.86
Ubr3Q5U430 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubr3Q5U430 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ubr3Q5U430 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.39■□□□□ 0.86
Ubr3Q5U430 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.39■□□□□ 0.86
Ubr3Q5U430 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ubr3Q5U430 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.39■□□□□ 0.85
Ubr3Q5U430 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ubr3Q5U430 Gm5682-201ENSMUST00000173402 505 ntBASIC20.39■□□□□ 0.85
Ubr3Q5U430 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Ubr3Q5U430 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ubr3Q5U430 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ubr3Q5U430 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.39■□□□□ 0.85
Ubr3Q5U430 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ubr3Q5U430 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ubr3Q5U430 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubr3Q5U430 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubr3Q5U430 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ubr3Q5U430 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.38■□□□□ 0.85
Ubr3Q5U430 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.38■□□□□ 0.85
Ubr3Q5U430 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.38■□□□□ 0.85
Ubr3Q5U430 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ubr3Q5U430 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubr3Q5U430 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubr3Q5U430 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubr3Q5U430 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubr3Q5U430 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubr3Q5U430 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.38■□□□□ 0.85
Ubr3Q5U430 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ubr3Q5U430 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ubr3Q5U430 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.37■□□□□ 0.85
Ubr3Q5U430 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.37■□□□□ 0.85
Ubr3Q5U430 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.37■□□□□ 0.85
Ubr3Q5U430 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.37■□□□□ 0.85
Ubr3Q5U430 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Ubr3Q5U430 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr3Q5U430 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr3Q5U430 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Ubr3Q5U430 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr3Q5U430 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr3Q5U430 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr3Q5U430 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
Ubr3Q5U430 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Ubr3Q5U430 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr3Q5U430 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr3Q5U430 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ubr3Q5U430 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ubr3Q5U430 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr3Q5U430 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr3Q5U430 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr3Q5U430 Mir3113-201ENSMUST00000175478 76 ntBASIC20.35■□□□□ 0.85
Ubr3Q5U430 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr3Q5U430 Gm9172-201ENSMUST00000212092 954 ntBASIC20.35■□□□□ 0.85
Ubr3Q5U430 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr3Q5U430 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.35■□□□□ 0.85
Ubr3Q5U430 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr3Q5U430 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.35■□□□□ 0.85
Ubr3Q5U430 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr3Q5U430 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr3Q5U430 Gm7222-201ENSMUST00000117512 906 ntBASIC20.35■□□□□ 0.85
Ubr3Q5U430 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.35■□□□□ 0.85
Ubr3Q5U430 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.35■□□□□ 0.85
Ubr3Q5U430 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ubr3Q5U430 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.34■□□□□ 0.85
Ubr3Q5U430 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr3Q5U430 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr3Q5U430 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr3Q5U430 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ubr3Q5U430 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.34■□□□□ 0.85
Ubr3Q5U430 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.34■□□□□ 0.85
Ubr3Q5U430 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.34■□□□□ 0.85
Ubr3Q5U430 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ubr3Q5U430 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms