Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Gm25016-201ENSMUST00000158399 131 ntBASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ctc1Q5SUQ9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Gm37025-201ENSMUST00000195159 829 ntBASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ctc1Q5SUQ9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctc1Q5SUQ9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctc1Q5SUQ9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctc1Q5SUQ9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Ctc1Q5SUQ9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ctc1Q5SUQ9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctc1Q5SUQ9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.77■□□□□ 0.44
Ctc1Q5SUQ9 Gm9103-201ENSMUST00000119371 405 ntBASIC17.77■□□□□ 0.44
Ctc1Q5SUQ9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctc1Q5SUQ9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ctc1Q5SUQ9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ctc1Q5SUQ9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ctc1Q5SUQ9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ctc1Q5SUQ9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ctc1Q5SUQ9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ctc1Q5SUQ9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ctc1Q5SUQ9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ctc1Q5SUQ9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ctc1Q5SUQ9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Gm16061-201ENSMUST00000122167 857 ntBASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Ank2-226ENSMUST00000189368 339 ntBASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.75■□□□□ 0.43
Ctc1Q5SUQ9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms