Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav2Q5R1I9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Trav2Q5R1I9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Gm27000-201ENSMUST00000182943 842 ntBASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav2Q5R1I9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Gm10566-201ENSMUST00000086739 996 ntBASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav2Q5R1I9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms