Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trav3-1Q5R1I8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Gm32699-201ENSMUST00000221728 1988 ntBASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-1Q5R1I8 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
Trav3-1Q5R1I8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Sybu-209ENSMUST00000228639 4113 ntBASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav3-1Q5R1I8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.42□□□□□ -0.58
Trav3-1Q5R1I8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms