Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-4Q5R1I0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.15□□□□□ -0.15
Trav6d-4Q5R1I0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Gm13186-201ENSMUST00000118031 316 ntBASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Gm37722-201ENSMUST00000193757 208 ntBASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-4Q5R1I0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Gm33142-201ENSMUST00000193913 867 ntBASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Phf7-203ENSMUST00000226565 1971 ntBASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-4Q5R1I0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Gm7367-201ENSMUST00000057611 492 ntBASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-4Q5R1I0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Gm11336-201ENSMUST00000118168 334 ntBASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Gm21362-201ENSMUST00000194272 928 ntBASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms