Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm1Q52KI8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm1Q52KI8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm1Q52KI8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm1Q52KI8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm1Q52KI8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm1Q52KI8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm1Q52KI8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm1Q52KI8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm1Q52KI8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Srrm1Q52KI8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Gm8000-201ENSMUST00000188378 592 ntBASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Srrm1Q52KI8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Srrm1Q52KI8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Gm5364-201ENSMUST00000216789 889 ntBASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Srrm1Q52KI8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Srrm1Q52KI8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Srrm1Q52KI8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms