Protein–RNA interactions for Protein: Q505F5

Lrrc47, Leucine-rich repeat-containing protein 47, mousemouse

Known RBP Predictions only

Length 581 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc47Q505F5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc47Q505F5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lrrc47Q505F5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc47Q505F5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc47Q505F5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.56■□□□□ 0.4
Lrrc47Q505F5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc47Q505F5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrrc47Q505F5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Mir3081-201ENSMUST00000175305 84 ntBASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Gm27357-201ENSMUST00000183754 135 ntBASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.55■□□□□ 0.4
Lrrc47Q505F5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Gm13186-201ENSMUST00000118031 316 ntBASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Gm11336-201ENSMUST00000118168 334 ntBASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Lrrc47Q505F5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Lrrc47Q505F5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lrrc47Q505F5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lrrc47Q505F5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lrrc47Q505F5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms