Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Gm17971-201ENSMUST00000190239 806 ntBASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Gm18669-201ENSMUST00000216049 778 ntBASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rc3h1Q4VGL6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rc3h1Q4VGL6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rc3h1Q4VGL6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rc3h1Q4VGL6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rc3h1Q4VGL6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Gm27741-201ENSMUST00000185060 237 ntBASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Gm29707-201ENSMUST00000196325 491 ntBASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rc3h1Q4VGL6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rc3h1Q4VGL6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.36■□□□□ 0.69
Rc3h1Q4VGL6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rc3h1Q4VGL6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms