Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Gm6659-201ENSMUST00000174752 547 ntBASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
R3hdm4Q4VBF2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
R3hdm4Q4VBF2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
R3hdm4Q4VBF2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
R3hdm4Q4VBF2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
R3hdm4Q4VBF2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms