Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Usp48Q3V0C5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp48Q3V0C5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp48Q3V0C5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp48Q3V0C5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp48Q3V0C5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp48Q3V0C5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp48Q3V0C5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp48Q3V0C5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp48Q3V0C5 AC132104.2-201ENSMUST00000215011 266 ntBASIC20.77■□□□□ 0.92
Usp48Q3V0C5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp48Q3V0C5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Usp48Q3V0C5 Actl10-202ENSMUST00000226583 1501 ntBASIC20.77■□□□□ 0.92
Usp48Q3V0C5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Usp48Q3V0C5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Gm10418-201ENSMUST00000100943 576 ntBASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp48Q3V0C5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp48Q3V0C5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp48Q3V0C5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp48Q3V0C5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp48Q3V0C5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Usp48Q3V0C5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp48Q3V0C5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp48Q3V0C5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp48Q3V0C5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp48Q3V0C5 Gm18206-201ENSMUST00000207027 926 ntBASIC20.73■□□□□ 0.91
Usp48Q3V0C5 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.73■□□□□ 0.91
Usp48Q3V0C5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp48Q3V0C5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp48Q3V0C5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Usp48Q3V0C5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp48Q3V0C5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Gm15794-201ENSMUST00000120182 631 ntBASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp48Q3V0C5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms