Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Gm7977-201ENSMUST00000193787 748 ntBASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nlrc4Q3UP24 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.71■□□□□ 0.42
Nlrc4Q3UP24 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Nlrc4Q3UP24 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nlrc4Q3UP24 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nlrc4Q3UP24 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Gm23634-201ENSMUST00000175071 91 ntBASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.67■□□□□ 0.42
Nlrc4Q3UP24 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Nlrc4Q3UP24 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms