Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Smcr8Q3UMB5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Gm27741-201ENSMUST00000185060 237 ntBASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smcr8Q3UMB5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Gm8969-201ENSMUST00000199694 526 ntBASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smcr8Q3UMB5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smcr8Q3UMB5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Smcr8Q3UMB5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Smcr8Q3UMB5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smcr8Q3UMB5 Gm27000-201ENSMUST00000182943 842 ntBASIC18.04■□□□□ 0.48
Smcr8Q3UMB5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.04■□□□□ 0.48
Smcr8Q3UMB5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Smcr8Q3UMB5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smcr8Q3UMB5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smcr8Q3UMB5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smcr8Q3UMB5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Gm17807-201ENSMUST00000186869 298 ntBASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smcr8Q3UMB5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smcr8Q3UMB5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smcr8Q3UMB5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smcr8Q3UMB5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smcr8Q3UMB5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smcr8Q3UMB5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smcr8Q3UMB5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.02■□□□□ 0.48
Smcr8Q3UMB5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.02■□□□□ 0.48
Smcr8Q3UMB5 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.02■□□□□ 0.48
Smcr8Q3UMB5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Smcr8Q3UMB5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.02■□□□□ 0.48
Smcr8Q3UMB5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smcr8Q3UMB5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Smcr8Q3UMB5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smcr8Q3UMB5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms