Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Phf7-203ENSMUST00000226565 1971 ntBASIC19.43■□□□□ 0.7
Ctdnep1Q3TP92 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Gm13186-201ENSMUST00000118031 316 ntBASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ctdnep1Q3TP92 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Gm10566-201ENSMUST00000086739 996 ntBASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctdnep1Q3TP92 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctdnep1Q3TP92 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ctdnep1Q3TP92 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.39■□□□□ 0.7
Ctdnep1Q3TP92 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctdnep1Q3TP92 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctdnep1Q3TP92 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms