Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.96□□□□□ -0.17
Trim63Q38HM4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Prob1-201ENSMUST00000097619 3021 ntBASIC13.96□□□□□ -0.17
Trim63Q38HM4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim63Q38HM4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Trim63Q38HM4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim63Q38HM4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim63Q38HM4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim63Q38HM4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim63Q38HM4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim63Q38HM4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim63Q38HM4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Idnk-204ENSMUST00000226010 1898 ntBASIC13.95□□□□□ -0.18
Trim63Q38HM4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim63Q38HM4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.94□□□□□ -0.18
Trim63Q38HM4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim63Q38HM4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.93□□□□□ -0.18
Trim63Q38HM4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.93□□□□□ -0.18
Trim63Q38HM4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim63Q38HM4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms