Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
Tff1Q08423 Gm13158-201ENSMUST00000122007 736 ntBASIC14□□□□□ -0.17
Tff1Q08423 H2-K2-201ENSMUST00000174250 1049 ntBASIC14□□□□□ -0.17
Tff1Q08423 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tff1Q08423 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Gm45412-201ENSMUST00000210217 2275 ntBASIC14□□□□□ -0.17
Tff1Q08423 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14□□□□□ -0.17
Tff1Q08423 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tff1Q08423 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14□□□□□ -0.17
Tff1Q08423 Gm15743-202ENSMUST00000182690 1901 ntBASIC14□□□□□ -0.17
Tff1Q08423 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.99□□□□□ -0.17
Tff1Q08423 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Tff1Q08423 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.99□□□□□ -0.17
Tff1Q08423 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.99□□□□□ -0.17
Tff1Q08423 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.99□□□□□ -0.17
Tff1Q08423 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.99□□□□□ -0.17
Tff1Q08423 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.99□□□□□ -0.17
Tff1Q08423 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tff1Q08423 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Tff1Q08423 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.99□□□□□ -0.17
Tff1Q08423 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tff1Q08423 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tff1Q08423 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Tff1Q08423 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Tff1Q08423 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Gm15375-201ENSMUST00000119510 849 ntBASIC13.98□□□□□ -0.17
Tff1Q08423 Gm10138-203ENSMUST00000206952 366 ntBASIC13.98□□□□□ -0.17
Tff1Q08423 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Tff1Q08423 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.98□□□□□ -0.17
Tff1Q08423 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.98□□□□□ -0.17
Tff1Q08423 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.98□□□□□ -0.17
Tff1Q08423 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Tff1Q08423 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.98□□□□□ -0.17
Tff1Q08423 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tff1Q08423 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tff1Q08423 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms