Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.01□□□□□ -0.01
SgcbP82349 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SgcbP82349 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SgcbP82349 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SgcbP82349 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SgcbP82349 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SgcbP82349 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SgcbP82349 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SgcbP82349 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15□□□□□ -0.01
SgcbP82349 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15□□□□□ -0.01
SgcbP82349 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SgcbP82349 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15□□□□□ -0.01
SgcbP82349 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
SgcbP82349 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15□□□□□ -0.01
SgcbP82349 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SgcbP82349 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15□□□□□ -0.01
SgcbP82349 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SgcbP82349 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15□□□□□ -0.01
SgcbP82349 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15□□□□□ -0.01
SgcbP82349 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SgcbP82349 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SgcbP82349 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
SgcbP82349 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15□□□□□ -0.01
SgcbP82349 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SgcbP82349 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SgcbP82349 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.99□□□□□ -0.01
SgcbP82349 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
SgcbP82349 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SgcbP82349 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SgcbP82349 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SgcbP82349 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SgcbP82349 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SgcbP82349 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SgcbP82349 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SgcbP82349 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SgcbP82349 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SgcbP82349 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.98□□□□□ -0.01
SgcbP82349 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.98□□□□□ -0.01
SgcbP82349 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SgcbP82349 Gm27000-201ENSMUST00000182943 842 ntBASIC14.98□□□□□ -0.01
SgcbP82349 Mir1668-201ENSMUST00000184114 107 ntBASIC14.98□□□□□ -0.01
SgcbP82349 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SgcbP82349 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SgcbP82349 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SgcbP82349 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SgcbP82349 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SgcbP82349 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.98□□□□□ -0.01
SgcbP82349 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SgcbP82349 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SgcbP82349 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
SgcbP82349 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Gm18032-201ENSMUST00000222541 538 ntBASIC14.97□□□□□ -0.01
SgcbP82349 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SgcbP82349 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.97□□□□□ -0.01
SgcbP82349 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.97□□□□□ -0.01
SgcbP82349 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SgcbP82349 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms