Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcgP82348 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
SgcgP82348 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcgP82348 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.58■□□□□ 0.25
SgcgP82348 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcgP82348 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcgP82348 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcgP82348 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.58■□□□□ 0.24
SgcgP82348 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.58■□□□□ 0.24
SgcgP82348 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SgcgP82348 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcgP82348 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SgcgP82348 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SgcgP82348 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
SgcgP82348 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcgP82348 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SgcgP82348 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcgP82348 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcgP82348 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcgP82348 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcgP82348 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SgcgP82348 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcgP82348 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.57■□□□□ 0.24
SgcgP82348 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
SgcgP82348 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Gm13186-201ENSMUST00000118031 316 ntBASIC16.57■□□□□ 0.24
SgcgP82348 Gm11336-201ENSMUST00000118168 334 ntBASIC16.57■□□□□ 0.24
SgcgP82348 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Gm8969-201ENSMUST00000199694 526 ntBASIC16.57■□□□□ 0.24
SgcgP82348 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SgcgP82348 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcgP82348 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcgP82348 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SgcgP82348 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.56■□□□□ 0.24
SgcgP82348 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcgP82348 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SgcgP82348 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.56■□□□□ 0.24
SgcgP82348 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcgP82348 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.56■□□□□ 0.24
SgcgP82348 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SgcgP82348 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SgcgP82348 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcgP82348 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.56■□□□□ 0.24
SgcgP82348 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcgP82348 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SgcgP82348 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcgP82348 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SgcgP82348 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcgP82348 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcgP82348 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SgcgP82348 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcgP82348 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcgP82348 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.55■□□□□ 0.24
SgcgP82348 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.55■□□□□ 0.24
SgcgP82348 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SgcgP82348 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcgP82348 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SgcgP82348 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms