Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Crnkl1P63154 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Crnkl1P63154 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Gm22325-201ENSMUST00000158904 308 ntBASIC16.68■□□□□ 0.26
Crnkl1P63154 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.68■□□□□ 0.26
Crnkl1P63154 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.68■□□□□ 0.26
Crnkl1P63154 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.68■□□□□ 0.26
Crnkl1P63154 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Crnkl1P63154 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Crnkl1P63154 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Crnkl1P63154 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Crnkl1P63154 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Crnkl1P63154 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.67■□□□□ 0.26
Crnkl1P63154 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Crnkl1P63154 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Crnkl1P63154 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Crnkl1P63154 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Crnkl1P63154 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.67■□□□□ 0.26
Crnkl1P63154 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.66■□□□□ 0.26
Crnkl1P63154 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Crnkl1P63154 Gm13148-201ENSMUST00000118892 745 ntBASIC16.66■□□□□ 0.26
Crnkl1P63154 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.66■□□□□ 0.26
Crnkl1P63154 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Crnkl1P63154 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.66■□□□□ 0.26
Crnkl1P63154 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.66■□□□□ 0.26
Crnkl1P63154 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.66■□□□□ 0.26
Crnkl1P63154 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Crnkl1P63154 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Crnkl1P63154 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.65■□□□□ 0.26
Crnkl1P63154 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.65■□□□□ 0.26
Crnkl1P63154 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Crnkl1P63154 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.65■□□□□ 0.26
Crnkl1P63154 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Crnkl1P63154 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Crnkl1P63154 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.65■□□□□ 0.26
Crnkl1P63154 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Crnkl1P63154 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Crnkl1P63154 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Crnkl1P63154 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Crnkl1P63154 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.64■□□□□ 0.25
Crnkl1P63154 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Crnkl1P63154 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms