Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpl39P62892 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Rpl39P62892 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rpl39P62892 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rpl39P62892 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl39P62892 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Rpl39P62892 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rpl39P62892 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rpl39P62892 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rpl39P62892 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Rpl39P62892 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Rpl39P62892 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.03□□□□□ -0.48
Rpl39P62892 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.03□□□□□ -0.48
Rpl39P62892 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.03□□□□□ -0.48
Rpl39P62892 Gm7291-201ENSMUST00000199147 382 ntBASIC12.03□□□□□ -0.48
Rpl39P62892 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rpl39P62892 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl39P62892 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.03□□□□□ -0.48
Rpl39P62892 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.03□□□□□ -0.48
Rpl39P62892 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rpl39P62892 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Rpl39P62892 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39P62892 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39P62892 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39P62892 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39P62892 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39P62892 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39P62892 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl39P62892 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Rpl39P62892 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rpl39P62892 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Rpl39P62892 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.02□□□□□ -0.49
Rpl39P62892 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.02□□□□□ -0.49
Rpl39P62892 Gm10493-201ENSMUST00000097270 612 ntBASIC12.02□□□□□ -0.49
Rpl39P62892 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rpl39P62892 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.02□□□□□ -0.49
Rpl39P62892 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Rpl39P62892 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl39P62892 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rpl39P62892 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rpl39P62892 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms