Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp20P57748 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp20P57748 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.21■□□□□ 0.67
Mmp20P57748 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp20P57748 Gm1401-201ENSMUST00000122048 772 ntBASIC19.21■□□□□ 0.67
Mmp20P57748 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.21■□□□□ 0.67
Mmp20P57748 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.21■□□□□ 0.67
Mmp20P57748 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp20P57748 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Mmp20P57748 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Mmp20P57748 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp20P57748 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp20P57748 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp20P57748 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp20P57748 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp20P57748 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp20P57748 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp20P57748 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp20P57748 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.21■□□□□ 0.67
Mmp20P57748 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.21■□□□□ 0.67
Mmp20P57748 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Mmp20P57748 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.2■□□□□ 0.66
Mmp20P57748 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.2■□□□□ 0.66
Mmp20P57748 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.2■□□□□ 0.66
Mmp20P57748 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.2■□□□□ 0.66
Mmp20P57748 Gm37935-201ENSMUST00000192012 982 ntBASIC19.2■□□□□ 0.66
Mmp20P57748 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.2■□□□□ 0.66
Mmp20P57748 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.2■□□□□ 0.66
Mmp20P57748 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp20P57748 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Mmp20P57748 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Mmp20P57748 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.19■□□□□ 0.66
Mmp20P57748 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.19■□□□□ 0.66
Mmp20P57748 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Mmp20P57748 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.19■□□□□ 0.66
Mmp20P57748 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp20P57748 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Mmp20P57748 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.18■□□□□ 0.66
Mmp20P57748 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.18■□□□□ 0.66
Mmp20P57748 Gm10060-201ENSMUST00000212002 111 ntBASIC19.18■□□□□ 0.66
Mmp20P57748 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Mmp20P57748 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp20P57748 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp20P57748 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp20P57748 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp20P57748 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp20P57748 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp20P57748 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Mmp20P57748 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.17■□□□□ 0.66
Mmp20P57748 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp20P57748 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp20P57748 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.17■□□□□ 0.66
Mmp20P57748 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp20P57748 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.17■□□□□ 0.66
Mmp20P57748 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp20P57748 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp20P57748 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms