Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NcanP55066 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.76■□□□□ 0.43
NcanP55066 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.76■□□□□ 0.43
NcanP55066 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NcanP55066 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NcanP55066 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NcanP55066 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NcanP55066 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NcanP55066 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
NcanP55066 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NcanP55066 Chchd1-203ENSMUST00000224633 557 ntBASIC17.75■□□□□ 0.43
NcanP55066 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NcanP55066 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NcanP55066 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.75■□□□□ 0.43
NcanP55066 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NcanP55066 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
NcanP55066 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NcanP55066 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NcanP55066 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NcanP55066 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NcanP55066 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NcanP55066 Gm14701-201ENSMUST00000117156 348 ntBASIC17.74■□□□□ 0.43
NcanP55066 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.74■□□□□ 0.43
NcanP55066 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NcanP55066 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NcanP55066 Mir6956-201ENSMUST00000183598 62 ntBASIC17.74■□□□□ 0.43
NcanP55066 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NcanP55066 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.74■□□□□ 0.43
NcanP55066 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NcanP55066 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NcanP55066 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NcanP55066 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NcanP55066 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NcanP55066 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NcanP55066 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Gm11780-201ENSMUST00000136880 516 ntBASIC17.73■□□□□ 0.43
NcanP55066 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NcanP55066 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NcanP55066 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NcanP55066 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NcanP55066 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NcanP55066 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.72■□□□□ 0.43
NcanP55066 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NcanP55066 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NcanP55066 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NcanP55066 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NcanP55066 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NcanP55066 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NcanP55066 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NcanP55066 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NcanP55066 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NcanP55066 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NcanP55066 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NcanP55066 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NcanP55066 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NcanP55066 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NcanP55066 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NcanP55066 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.71■□□□□ 0.43
NcanP55066 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.71■□□□□ 0.43
NcanP55066 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
NcanP55066 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NcanP55066 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.71■□□□□ 0.43
NcanP55066 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NcanP55066 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NcanP55066 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NcanP55066 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NcanP55066 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NcanP55066 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NcanP55066 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NcanP55066 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.7■□□□□ 0.42
NcanP55066 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NcanP55066 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.7■□□□□ 0.42
NcanP55066 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.7■□□□□ 0.42
NcanP55066 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NcanP55066 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NcanP55066 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.7■□□□□ 0.42
NcanP55066 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NcanP55066 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NcanP55066 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NcanP55066 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NcanP55066 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.7■□□□□ 0.42
NcanP55066 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
NcanP55066 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NcanP55066 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms