Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NrlP54846 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NrlP54846 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NrlP54846 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.89■□□□□ 0.45
NrlP54846 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.88■□□□□ 0.45
NrlP54846 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NrlP54846 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.88■□□□□ 0.45
NrlP54846 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NrlP54846 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NrlP54846 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
NrlP54846 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NrlP54846 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NrlP54846 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NrlP54846 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NrlP54846 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NrlP54846 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NrlP54846 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NrlP54846 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
NrlP54846 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.87■□□□□ 0.45
NrlP54846 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.87■□□□□ 0.45
NrlP54846 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NrlP54846 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NrlP54846 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NrlP54846 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NrlP54846 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NrlP54846 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NrlP54846 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NrlP54846 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NrlP54846 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NrlP54846 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.87■□□□□ 0.45
NrlP54846 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NrlP54846 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NrlP54846 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NrlP54846 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NrlP54846 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NrlP54846 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NrlP54846 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NrlP54846 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NrlP54846 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.86■□□□□ 0.45
NrlP54846 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NrlP54846 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NrlP54846 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NrlP54846 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.86■□□□□ 0.45
NrlP54846 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NrlP54846 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.86■□□□□ 0.45
NrlP54846 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NrlP54846 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NrlP54846 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Gm11336-201ENSMUST00000118168 334 ntBASIC17.85■□□□□ 0.45
NrlP54846 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.85■□□□□ 0.45
NrlP54846 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NrlP54846 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NrlP54846 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.85■□□□□ 0.45
NrlP54846 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.85■□□□□ 0.45
NrlP54846 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
NrlP54846 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NrlP54846 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NrlP54846 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.85■□□□□ 0.45
NrlP54846 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NrlP54846 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NrlP54846 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.84■□□□□ 0.45
NrlP54846 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NrlP54846 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NrlP54846 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.84■□□□□ 0.45
NrlP54846 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.84■□□□□ 0.45
NrlP54846 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NrlP54846 Gm28659-201ENSMUST00000188013 759 ntBASIC17.84■□□□□ 0.45
NrlP54846 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NrlP54846 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NrlP54846 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NrlP54846 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NrlP54846 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NrlP54846 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NrlP54846 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NrlP54846 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NrlP54846 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NrlP54846 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms