Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc3P49135 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Ercc3P49135 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc3P49135 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ercc3P49135 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc3P49135 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc3P49135 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc3P49135 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ercc3P49135 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc3P49135 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.94■□□□□ 0.78
Ercc3P49135 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc3P49135 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc3P49135 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc3P49135 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Ercc3P49135 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc3P49135 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ercc3P49135 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc3P49135 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.93■□□□□ 0.78
Ercc3P49135 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc3P49135 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ercc3P49135 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc3P49135 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc3P49135 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc3P49135 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc3P49135 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ercc3P49135 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ercc3P49135 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ercc3P49135 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.92■□□□□ 0.78
Ercc3P49135 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Ercc3P49135 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Ercc3P49135 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.92■□□□□ 0.78
Ercc3P49135 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ercc3P49135 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.92■□□□□ 0.78
Ercc3P49135 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Ercc3P49135 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Ercc3P49135 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.92■□□□□ 0.78
Ercc3P49135 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ercc3P49135 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Ercc3P49135 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc3P49135 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.91■□□□□ 0.78
Ercc3P49135 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ercc3P49135 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.91■□□□□ 0.78
Ercc3P49135 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc3P49135 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc3P49135 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc3P49135 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc3P49135 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc3P49135 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc3P49135 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc3P49135 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc3P49135 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.91■□□□□ 0.78
Ercc3P49135 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc3P49135 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ercc3P49135 Actl10-202ENSMUST00000226583 1501 ntBASIC19.91■□□□□ 0.78
Ercc3P49135 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ercc3P49135 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ercc3P49135 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc3P49135 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Ercc3P49135 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc3P49135 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc3P49135 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc3P49135 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc3P49135 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Ercc3P49135 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc3P49135 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc3P49135 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc3P49135 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc3P49135 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc3P49135 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc3P49135 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.9■□□□□ 0.78
Ercc3P49135 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ercc3P49135 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ercc3P49135 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
Ercc3P49135 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc3P49135 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc3P49135 Gm13474-201ENSMUST00000122466 815 ntBASIC19.89■□□□□ 0.77
Ercc3P49135 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc3P49135 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.89■□□□□ 0.77
Ercc3P49135 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Ercc3P49135 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc3P49135 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc3P49135 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc3P49135 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc3P49135 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc3P49135 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ercc3P49135 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.89■□□□□ 0.77
Ercc3P49135 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms