Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh2P43247 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Msh2P43247 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh2P43247 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Msh2P43247 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh2P43247 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh2P43247 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh2P43247 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh2P43247 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Msh2P43247 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.33■□□□□ 0.36
Msh2P43247 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh2P43247 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.33■□□□□ 0.36
Msh2P43247 Gm6576-201ENSMUST00000169678 883 ntBASIC17.33■□□□□ 0.36
Msh2P43247 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Msh2P43247 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh2P43247 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.33■□□□□ 0.36
Msh2P43247 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Msh2P43247 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh2P43247 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh2P43247 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.32■□□□□ 0.36
Msh2P43247 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.32■□□□□ 0.36
Msh2P43247 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Msh2P43247 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Msh2P43247 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh2P43247 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.32■□□□□ 0.36
Msh2P43247 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh2P43247 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh2P43247 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.31■□□□□ 0.36
Msh2P43247 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Msh2P43247 Gm13401-201ENSMUST00000117074 291 ntBASIC17.31■□□□□ 0.36
Msh2P43247 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.31■□□□□ 0.36
Msh2P43247 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.31■□□□□ 0.36
Msh2P43247 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Msh2P43247 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh2P43247 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh2P43247 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh2P43247 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh2P43247 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh2P43247 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Msh2P43247 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh2P43247 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Msh2P43247 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Msh2P43247 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.3■□□□□ 0.36
Msh2P43247 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh2P43247 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh2P43247 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh2P43247 Mir1199-201ENSMUST00000117015 119 ntBASIC17.3■□□□□ 0.36
Msh2P43247 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Msh2P43247 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh2P43247 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh2P43247 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh2P43247 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Msh2P43247 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh2P43247 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Msh2P43247 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh2P43247 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Msh2P43247 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Msh2P43247 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Msh2P43247 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.29■□□□□ 0.36
Msh2P43247 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.29■□□□□ 0.36
Msh2P43247 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.29■□□□□ 0.36
Msh2P43247 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Msh2P43247 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Msh2P43247 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Msh2P43247 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms