Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.98■□□□□ 0.47
HttP42859 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HttP42859 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HttP42859 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
HttP42859 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HttP42859 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HttP42859 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HttP42859 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.97■□□□□ 0.47
HttP42859 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HttP42859 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HttP42859 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.96■□□□□ 0.47
HttP42859 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.96■□□□□ 0.47
HttP42859 Gm29707-201ENSMUST00000196325 491 ntBASIC17.96■□□□□ 0.47
HttP42859 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HttP42859 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HttP42859 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
HttP42859 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HttP42859 Gm11764-201ENSMUST00000120221 623 ntBASIC17.96■□□□□ 0.47
HttP42859 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.96■□□□□ 0.47
HttP42859 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HttP42859 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HttP42859 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HttP42859 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HttP42859 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
HttP42859 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HttP42859 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HttP42859 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HttP42859 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.96■□□□□ 0.47
HttP42859 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HttP42859 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HttP42859 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.95■□□□□ 0.46
HttP42859 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HttP42859 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HttP42859 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HttP42859 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HttP42859 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HttP42859 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.95■□□□□ 0.46
HttP42859 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HttP42859 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.95■□□□□ 0.46
HttP42859 Gm12497-201ENSMUST00000138778 237 ntBASIC17.95■□□□□ 0.46
HttP42859 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HttP42859 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HttP42859 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HttP42859 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.95■□□□□ 0.46
HttP42859 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HttP42859 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HttP42859 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HttP42859 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HttP42859 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HttP42859 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HttP42859 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HttP42859 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.94■□□□□ 0.46
HttP42859 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HttP42859 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HttP42859 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HttP42859 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.93■□□□□ 0.46
HttP42859 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HttP42859 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HttP42859 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HttP42859 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HttP42859 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HttP42859 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HttP42859 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HttP42859 Gm43767-201ENSMUST00000198933 381 ntBASIC17.93■□□□□ 0.46
HttP42859 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.93■□□□□ 0.46
HttP42859 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HttP42859 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HttP42859 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HttP42859 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
HttP42859 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.92■□□□□ 0.46
HttP42859 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HttP42859 Gm25745-201ENSMUST00000174945 133 ntBASIC17.92■□□□□ 0.46
HttP42859 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.92■□□□□ 0.46
HttP42859 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HttP42859 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HttP42859 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HttP42859 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.92■□□□□ 0.46
HttP42859 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HttP42859 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.92■□□□□ 0.46
HttP42859 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms