Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-2P42580 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-2P42580 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-2P42580 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-2P42580 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-2P42580 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-2P42580 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-2P42580 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-2P42580 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-2P42580 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-2P42580 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-2P42580 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-2P42580 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-2P42580 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.69■□□□□ 0.9
Nkx1-2P42580 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-2P42580 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-2P42580 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-2P42580 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-2P42580 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-2P42580 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx1-2P42580 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Gm20760-201ENSMUST00000179197 648 ntBASIC20.68■□□□□ 0.9
Nkx1-2P42580 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Nkx1-2P42580 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx1-2P42580 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-2P42580 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-2P42580 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-2P42580 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-2P42580 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-2P42580 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-2P42580 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-2P42580 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.67■□□□□ 0.9
Nkx1-2P42580 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.67■□□□□ 0.9
Nkx1-2P42580 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-2P42580 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-2P42580 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx1-2P42580 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Gm17661-201ENSMUST00000170317 270 ntBASIC20.66■□□□□ 0.9
Nkx1-2P42580 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.66■□□□□ 0.9
Nkx1-2P42580 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.66■□□□□ 0.9
Nkx1-2P42580 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.66■□□□□ 0.9
Nkx1-2P42580 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.65■□□□□ 0.9
Nkx1-2P42580 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-2P42580 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx1-2P42580 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx1-2P42580 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx1-2P42580 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx1-2P42580 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkx1-2P42580 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Nkx1-2P42580 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx1-2P42580 Gm12085-201ENSMUST00000119263 940 ntBASIC20.64■□□□□ 0.89
Nkx1-2P42580 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.64■□□□□ 0.89
Nkx1-2P42580 Gm37025-201ENSMUST00000195159 829 ntBASIC20.64■□□□□ 0.89
Nkx1-2P42580 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx1-2P42580 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nkx1-2P42580 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx1-2P42580 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx1-2P42580 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms