Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HmgclP38060 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HmgclP38060 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.56■□□□□ 0.24
HmgclP38060 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.56■□□□□ 0.24
HmgclP38060 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Mir5130-201ENSMUST00000175160 84 ntBASIC16.56■□□□□ 0.24
HmgclP38060 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.56■□□□□ 0.24
HmgclP38060 Gm7213-201ENSMUST00000215977 950 ntBASIC16.56■□□□□ 0.24
HmgclP38060 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HmgclP38060 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.56■□□□□ 0.24
HmgclP38060 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HmgclP38060 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.55■□□□□ 0.24
HmgclP38060 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HmgclP38060 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HmgclP38060 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.55■□□□□ 0.24
HmgclP38060 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.55■□□□□ 0.24
HmgclP38060 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HmgclP38060 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HmgclP38060 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.55■□□□□ 0.24
HmgclP38060 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HmgclP38060 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HmgclP38060 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.54■□□□□ 0.24
HmgclP38060 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.54■□□□□ 0.24
HmgclP38060 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.54■□□□□ 0.24
HmgclP38060 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.54■□□□□ 0.24
HmgclP38060 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.54■□□□□ 0.24
HmgclP38060 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Mir1668-201ENSMUST00000184114 107 ntBASIC16.54■□□□□ 0.24
HmgclP38060 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.54■□□□□ 0.24
HmgclP38060 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HmgclP38060 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.54■□□□□ 0.24
HmgclP38060 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HmgclP38060 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HmgclP38060 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HmgclP38060 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HmgclP38060 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.53■□□□□ 0.24
HmgclP38060 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HmgclP38060 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.53■□□□□ 0.24
HmgclP38060 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HmgclP38060 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HmgclP38060 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.53■□□□□ 0.24
HmgclP38060 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HmgclP38060 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HmgclP38060 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
HmgclP38060 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HmgclP38060 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HmgclP38060 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HmgclP38060 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
HmgclP38060 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.52■□□□□ 0.24
HmgclP38060 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms