Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Thbs1P35441 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Thbs1P35441 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Thbs1P35441 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Thbs1P35441 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Thbs1P35441 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Thbs1P35441 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Thbs1P35441 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.52■□□□□ 0.08
Thbs1P35441 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thbs1P35441 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thbs1P35441 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thbs1P35441 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Thbs1P35441 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Thbs1P35441 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thbs1P35441 Mir5122-201ENSMUST00000175004 89 ntBASIC15.52■□□□□ 0.08
Thbs1P35441 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Thbs1P35441 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Thbs1P35441 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.52■□□□□ 0.08
Thbs1P35441 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.52■□□□□ 0.08
Thbs1P35441 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thbs1P35441 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thbs1P35441 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Thbs1P35441 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Thbs1P35441 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Thbs1P35441 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Thbs1P35441 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thbs1P35441 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Thbs1P35441 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thbs1P35441 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thbs1P35441 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Thbs1P35441 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thbs1P35441 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thbs1P35441 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thbs1P35441 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Thbs1P35441 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Thbs1P35441 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Thbs1P35441 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Thbs1P35441 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.51■□□□□ 0.07
Thbs1P35441 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thbs1P35441 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thbs1P35441 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.51■□□□□ 0.07
Thbs1P35441 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.51■□□□□ 0.07
Thbs1P35441 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Thbs1P35441 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thbs1P35441 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Thbs1P35441 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.51■□□□□ 0.07
Thbs1P35441 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.51■□□□□ 0.07
Thbs1P35441 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Thbs1P35441 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Thbs1P35441 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.51■□□□□ 0.07
Thbs1P35441 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thbs1P35441 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Thbs1P35441 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.5■□□□□ 0.07
Thbs1P35441 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.5■□□□□ 0.07
Thbs1P35441 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Gm27463-201ENSMUST00000183569 57 ntBASIC15.5■□□□□ 0.07
Thbs1P35441 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.5■□□□□ 0.07
Thbs1P35441 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.5■□□□□ 0.07
Thbs1P35441 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Thbs1P35441 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.5■□□□□ 0.07
Thbs1P35441 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Thbs1P35441 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Thbs1P35441 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thbs1P35441 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Thbs1P35441 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thbs1P35441 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thbs1P35441 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thbs1P35441 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thbs1P35441 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thbs1P35441 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thbs1P35441 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thbs1P35441 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thbs1P35441 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Thbs1P35441 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms