Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smim1P0C8K7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Smim1P0C8K7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smim1P0C8K7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Gm7417-201ENSMUST00000192950 473 ntBASIC11.64□□□□□ -0.55
Smim1P0C8K7 Gm18755-201ENSMUST00000218030 1099 ntBASIC11.64□□□□□ -0.55
Smim1P0C8K7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Smim1P0C8K7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smim1P0C8K7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smim1P0C8K7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Smim1P0C8K7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Gm11421-201ENSMUST00000122124 294 ntBASIC11.62□□□□□ -0.55
Smim1P0C8K7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.62□□□□□ -0.55
Smim1P0C8K7 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.62□□□□□ -0.55
Smim1P0C8K7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Smim1P0C8K7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.61□□□□□ -0.55
Smim1P0C8K7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms