Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
TcraP01849 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Gm13234-201ENSMUST00000120010 747 ntBASIC12.34□□□□□ -0.43
TcraP01849 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.34□□□□□ -0.43
TcraP01849 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TcraP01849 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
TcraP01849 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
TcraP01849 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.33□□□□□ -0.43
TcraP01849 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TcraP01849 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TcraP01849 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.33□□□□□ -0.44
TcraP01849 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.33□□□□□ -0.44
TcraP01849 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TcraP01849 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.33□□□□□ -0.44
TcraP01849 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TcraP01849 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
TcraP01849 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TcraP01849 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.33□□□□□ -0.44
TcraP01849 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TcraP01849 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TcraP01849 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
TcraP01849 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TcraP01849 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TcraP01849 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.32□□□□□ -0.44
TcraP01849 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TcraP01849 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
TcraP01849 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TcraP01849 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.32□□□□□ -0.44
TcraP01849 Gm22325-201ENSMUST00000158904 308 ntBASIC12.32□□□□□ -0.44
TcraP01849 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.32□□□□□ -0.44
TcraP01849 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.32□□□□□ -0.44
TcraP01849 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.32□□□□□ -0.44
TcraP01849 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TcraP01849 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
TcraP01849 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TcraP01849 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TcraP01849 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.31□□□□□ -0.44
TcraP01849 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.31□□□□□ -0.44
TcraP01849 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
TcraP01849 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.31□□□□□ -0.44
TcraP01849 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TcraP01849 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms