Protein–RNA interactions for Protein: P00416

mt-Co3, Cytochrome c oxidase subunit 3, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
mt-Co3P00416 Gm14057-201ENSMUST00000120631 482 ntBASIC17.13■□□□□ 0.33
mt-Co3P00416 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
mt-Co3P00416 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
mt-Co3P00416 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.13■□□□□ 0.33
mt-Co3P00416 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
mt-Co3P00416 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.13■□□□□ 0.33
mt-Co3P00416 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.13■□□□□ 0.33
mt-Co3P00416 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
mt-Co3P00416 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
mt-Co3P00416 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
mt-Co3P00416 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
mt-Co3P00416 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
mt-Co3P00416 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
mt-Co3P00416 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
mt-Co3P00416 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.12■□□□□ 0.33
mt-Co3P00416 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
mt-Co3P00416 Gm15920-201ENSMUST00000118998 402 ntBASIC17.12■□□□□ 0.33
mt-Co3P00416 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.12■□□□□ 0.33
mt-Co3P00416 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.12■□□□□ 0.33
mt-Co3P00416 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
mt-Co3P00416 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
mt-Co3P00416 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
mt-Co3P00416 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
mt-Co3P00416 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
mt-Co3P00416 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
mt-Co3P00416 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
mt-Co3P00416 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
mt-Co3P00416 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
mt-Co3P00416 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
mt-Co3P00416 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.11■□□□□ 0.33
mt-Co3P00416 Gm25911-201ENSMUST00000157621 56 ntBASIC17.11■□□□□ 0.33
mt-Co3P00416 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
mt-Co3P00416 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
mt-Co3P00416 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.11■□□□□ 0.33
mt-Co3P00416 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
mt-Co3P00416 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.11■□□□□ 0.33
mt-Co3P00416 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.11■□□□□ 0.33
mt-Co3P00416 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
mt-Co3P00416 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
mt-Co3P00416 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
mt-Co3P00416 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
mt-Co3P00416 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
mt-Co3P00416 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
mt-Co3P00416 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
mt-Co3P00416 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
mt-Co3P00416 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
mt-Co3P00416 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.1■□□□□ 0.33
mt-Co3P00416 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.1■□□□□ 0.33
mt-Co3P00416 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
mt-Co3P00416 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.1■□□□□ 0.33
mt-Co3P00416 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
mt-Co3P00416 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
mt-Co3P00416 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
mt-Co3P00416 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
mt-Co3P00416 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.1■□□□□ 0.33
mt-Co3P00416 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
mt-Co3P00416 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
mt-Co3P00416 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.1■□□□□ 0.33
mt-Co3P00416 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
mt-Co3P00416 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
mt-Co3P00416 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
mt-Co3P00416 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
mt-Co3P00416 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.09■□□□□ 0.33
mt-Co3P00416 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.09■□□□□ 0.33
mt-Co3P00416 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.09■□□□□ 0.33
mt-Co3P00416 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
mt-Co3P00416 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.09■□□□□ 0.33
mt-Co3P00416 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
mt-Co3P00416 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
mt-Co3P00416 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
mt-Co3P00416 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
mt-Co3P00416 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
mt-Co3P00416 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
mt-Co3P00416 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
mt-Co3P00416 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.08■□□□□ 0.32
mt-Co3P00416 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
mt-Co3P00416 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.08■□□□□ 0.32
mt-Co3P00416 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
mt-Co3P00416 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
mt-Co3P00416 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
mt-Co3P00416 Gm5186-201ENSMUST00000218781 920 ntBASIC17.08■□□□□ 0.32
mt-Co3P00416 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
mt-Co3P00416 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
mt-Co3P00416 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
mt-Co3P00416 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
mt-Co3P00416 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms