Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Gm13168-201ENSMUST00000121771 632 ntBASIC11.92□□□□□ -0.5
Sh2d1aO88890 Gm20760-201ENSMUST00000179197 648 ntBASIC11.92□□□□□ -0.5
Sh2d1aO88890 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.92□□□□□ -0.5
Sh2d1aO88890 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sh2d1aO88890 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sh2d1aO88890 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.91□□□□□ -0.5
Sh2d1aO88890 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.91□□□□□ -0.5
Sh2d1aO88890 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh2d1aO88890 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.9□□□□□ -0.5
Sh2d1aO88890 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Gm15743-202ENSMUST00000182690 1901 ntBASIC11.9□□□□□ -0.5
Sh2d1aO88890 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh2d1aO88890 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sh2d1aO88890 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sh2d1aO88890 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sh2d1aO88890 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sh2d1aO88890 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sh2d1aO88890 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms