Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.11■□□□□ 0.17
Hcn1O88704 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.11■□□□□ 0.17
Hcn1O88704 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.11■□□□□ 0.17
Hcn1O88704 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.11■□□□□ 0.17
Hcn1O88704 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Gm3375-201ENSMUST00000203929 796 ntBASIC16.11■□□□□ 0.17
Hcn1O88704 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Hcn1O88704 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hcn1O88704 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.1■□□□□ 0.17
Hcn1O88704 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Hcn1O88704 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Hcn1O88704 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.1■□□□□ 0.17
Hcn1O88704 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Hcn1O88704 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Hcn1O88704 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Hcn1O88704 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Hcn1O88704 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Hcn1O88704 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcn1O88704 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Hcn1O88704 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.09■□□□□ 0.17
Hcn1O88704 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hcn1O88704 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Hcn1O88704 Gm15565-201ENSMUST00000118890 427 ntBASIC16.09■□□□□ 0.17
Hcn1O88704 Gm12085-201ENSMUST00000119263 940 ntBASIC16.09■□□□□ 0.17
Hcn1O88704 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.09■□□□□ 0.17
Hcn1O88704 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.09■□□□□ 0.17
Hcn1O88704 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcn1O88704 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Hcn1O88704 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Hcn1O88704 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Hcn1O88704 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hcn1O88704 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hcn1O88704 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Hcn1O88704 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hcn1O88704 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Hcn1O88704 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hcn1O88704 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.08■□□□□ 0.16
Hcn1O88704 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Hcn1O88704 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hcn1O88704 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Hcn1O88704 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hcn1O88704 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Hcn1O88704 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms