Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cldn1O88551 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn1O88551 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cldn1O88551 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.4□□□□□ -0.1
Cldn1O88551 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.4□□□□□ -0.1
Cldn1O88551 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn1O88551 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.4□□□□□ -0.1
Cldn1O88551 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.4□□□□□ -0.1
Cldn1O88551 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.4□□□□□ -0.1
Cldn1O88551 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cldn1O88551 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cldn1O88551 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cldn1O88551 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 Gm11452-201ENSMUST00000122376 690 ntBASIC14.39□□□□□ -0.11
Cldn1O88551 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.39□□□□□ -0.11
Cldn1O88551 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cldn1O88551 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Cldn1O88551 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Cldn1O88551 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.39□□□□□ -0.11
Cldn1O88551 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Cldn1O88551 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cldn1O88551 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cldn1O88551 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cldn1O88551 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.39□□□□□ -0.11
Cldn1O88551 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
Cldn1O88551 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cldn1O88551 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 Gm15794-201ENSMUST00000120182 631 ntBASIC14.38□□□□□ -0.11
Cldn1O88551 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.38□□□□□ -0.11
Cldn1O88551 Gm29791-202ENSMUST00000207888 369 ntBASIC14.38□□□□□ -0.11
Cldn1O88551 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.38□□□□□ -0.11
Cldn1O88551 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.38□□□□□ -0.11
Cldn1O88551 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cldn1O88551 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.38□□□□□ -0.11
Cldn1O88551 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cldn1O88551 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Cldn1O88551 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn1O88551 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn1O88551 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn1O88551 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.37□□□□□ -0.11
Cldn1O88551 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.37□□□□□ -0.11
Cldn1O88551 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn1O88551 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.37□□□□□ -0.11
Cldn1O88551 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Cldn1O88551 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.37□□□□□ -0.11
Cldn1O88551 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn1O88551 Gm18733-201ENSMUST00000173950 856 ntBASIC14.37□□□□□ -0.11
Cldn1O88551 Gm27525-201ENSMUST00000184465 107 ntBASIC14.37□□□□□ -0.11
Cldn1O88551 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn1O88551 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Cldn1O88551 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn1O88551 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn1O88551 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn1O88551 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn1O88551 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn1O88551 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cldn1O88551 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.37□□□□□ -0.11
Cldn1O88551 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.37□□□□□ -0.11
Cldn1O88551 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn1O88551 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Cldn1O88551 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms