Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ubr1O70481 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr1O70481 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ubr1O70481 Gm12497-201ENSMUST00000138778 237 ntBASIC21.79■■□□□ 1.08
Ubr1O70481 Gm6376-201ENSMUST00000209407 580 ntBASIC21.79■■□□□ 1.08
Ubr1O70481 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC21.79■■□□□ 1.08
Ubr1O70481 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ubr1O70481 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC21.78■■□□□ 1.08
Ubr1O70481 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Ubr1O70481 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr1O70481 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr1O70481 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr1O70481 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr1O70481 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr1O70481 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr1O70481 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr1O70481 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ubr1O70481 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr1O70481 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr1O70481 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr1O70481 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ubr1O70481 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr1O70481 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr1O70481 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr1O70481 Gm7862-201ENSMUST00000121461 292 ntBASIC21.77■■□□□ 1.08
Ubr1O70481 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr1O70481 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC21.77■■□□□ 1.08
Ubr1O70481 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr1O70481 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr1O70481 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr1O70481 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ubr1O70481 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC21.76■■□□□ 1.07
Ubr1O70481 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr1O70481 AC114585.2-202ENSMUST00000228094 426 ntBASIC21.76■■□□□ 1.07
Ubr1O70481 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ubr1O70481 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr1O70481 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr1O70481 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr1O70481 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr1O70481 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr1O70481 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr1O70481 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.76■■□□□ 1.07
Ubr1O70481 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC21.76■■□□□ 1.07
Ubr1O70481 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.76■■□□□ 1.07
Ubr1O70481 Gm36967-201ENSMUST00000193814 266 ntBASIC21.76■■□□□ 1.07
Ubr1O70481 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ubr1O70481 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr1O70481 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr1O70481 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ubr1O70481 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ubr1O70481 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ubr1O70481 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Ubr1O70481 Gm4459-201ENSMUST00000118750 468 ntBASIC21.75■■□□□ 1.07
Ubr1O70481 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ubr1O70481 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC21.75■■□□□ 1.07
Ubr1O70481 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.75■■□□□ 1.07
Ubr1O70481 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.75■■□□□ 1.07
Ubr1O70481 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.75■■□□□ 1.07
Ubr1O70481 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ubr1O70481 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ubr1O70481 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.75■■□□□ 1.07
Ubr1O70481 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ubr1O70481 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC21.74■■□□□ 1.07
Ubr1O70481 Gm4995-201ENSMUST00000117247 432 ntBASIC21.74■■□□□ 1.07
Ubr1O70481 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Ubr1O70481 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC21.74■■□□□ 1.07
Ubr1O70481 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr1O70481 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC21.74■■□□□ 1.07
Ubr1O70481 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr1O70481 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr1O70481 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr1O70481 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Ubr1O70481 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr1O70481 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr1O70481 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr1O70481 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC21.74■■□□□ 1.07
Ubr1O70481 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC21.74■■□□□ 1.07
Ubr1O70481 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr1O70481 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC21.73■■□□□ 1.07
Ubr1O70481 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr1O70481 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr1O70481 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr1O70481 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr1O70481 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Ubr1O70481 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr1O70481 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ubr1O70481 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.73■■□□□ 1.07
Ubr1O70481 Gm25406-201ENSMUST00000157599 105 ntBASIC21.73■■□□□ 1.07
Ubr1O70481 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr1O70481 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC21.73■■□□□ 1.07
Ubr1O70481 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr1O70481 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr1O70481 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr1O70481 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ubr1O70481 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.72■■□□□ 1.07
Ubr1O70481 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr1O70481 Gm4535-201ENSMUST00000182274 558 ntBASIC21.72■■□□□ 1.07
Ubr1O70481 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC21.72■■□□□ 1.07
Ubr1O70481 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.72■■□□□ 1.07
Ubr1O70481 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms