Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.71■□□□□ 0.27
Pknox1O70477 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pknox1O70477 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 Dancr-204ENSMUST00000132389 2347 ntBASIC16.71■□□□□ 0.27
Pknox1O70477 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pknox1O70477 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pknox1O70477 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Pknox1O70477 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pknox1O70477 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pknox1O70477 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pknox1O70477 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pknox1O70477 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pknox1O70477 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pknox1O70477 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pknox1O70477 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pknox1O70477 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pknox1O70477 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.7■□□□□ 0.26
Pknox1O70477 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pknox1O70477 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pknox1O70477 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pknox1O70477 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pknox1O70477 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pknox1O70477 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.69■□□□□ 0.26
Pknox1O70477 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Pknox1O70477 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pknox1O70477 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pknox1O70477 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pknox1O70477 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.68■□□□□ 0.26
Pknox1O70477 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Gm9731-201ENSMUST00000209480 747 ntBASIC16.68■□□□□ 0.26
Pknox1O70477 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.68■□□□□ 0.26
Pknox1O70477 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pknox1O70477 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.67■□□□□ 0.26
Pknox1O70477 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.67■□□□□ 0.26
Pknox1O70477 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Gm20760-201ENSMUST00000179197 648 ntBASIC16.67■□□□□ 0.26
Pknox1O70477 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.67■□□□□ 0.26
Pknox1O70477 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.67■□□□□ 0.26
Pknox1O70477 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Pknox1O70477 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pknox1O70477 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pknox1O70477 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pknox1O70477 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms