Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Pdlim1O70400 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.61■□□□□ 0.25
Pdlim1O70400 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pdlim1O70400 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pdlim1O70400 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim1O70400 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim1O70400 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim1O70400 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim1O70400 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim1O70400 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim1O70400 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim1O70400 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.6■□□□□ 0.25
Pdlim1O70400 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.6■□□□□ 0.25
Pdlim1O70400 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.6■□□□□ 0.25
Pdlim1O70400 Gm10566-201ENSMUST00000086739 996 ntBASIC16.6■□□□□ 0.25
Pdlim1O70400 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim1O70400 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pdlim1O70400 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.6■□□□□ 0.25
Pdlim1O70400 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim1O70400 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim1O70400 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim1O70400 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim1O70400 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim1O70400 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim1O70400 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pdlim1O70400 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim1O70400 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim1O70400 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pdlim1O70400 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim1O70400 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.59■□□□□ 0.25
Pdlim1O70400 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim1O70400 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim1O70400 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim1O70400 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim1O70400 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim1O70400 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.59■□□□□ 0.25
Pdlim1O70400 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pdlim1O70400 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Pdlim1O70400 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim1O70400 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim1O70400 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pdlim1O70400 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim1O70400 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.58■□□□□ 0.24
Pdlim1O70400 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.58■□□□□ 0.24
Pdlim1O70400 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim1O70400 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim1O70400 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim1O70400 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim1O70400 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim1O70400 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pdlim1O70400 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim1O70400 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim1O70400 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.58■□□□□ 0.24
Pdlim1O70400 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim1O70400 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.58■□□□□ 0.24
Pdlim1O70400 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim1O70400 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Pdlim1O70400 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pdlim1O70400 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pdlim1O70400 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pdlim1O70400 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
Pdlim1O70400 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.57■□□□□ 0.24
Pdlim1O70400 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim1O70400 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pdlim1O70400 Phf7-203ENSMUST00000226565 1971 ntBASIC16.57■□□□□ 0.24
Pdlim1O70400 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim1O70400 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.56■□□□□ 0.24
Pdlim1O70400 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim1O70400 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim1O70400 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim1O70400 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim1O70400 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim1O70400 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim1O70400 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim1O70400 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim1O70400 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim1O70400 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim1O70400 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdlim1O70400 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms