Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag2O35638 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag2O35638 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag2O35638 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag2O35638 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag2O35638 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Stag2O35638 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag2O35638 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.25■□□□□ 0.67
Stag2O35638 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag2O35638 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag2O35638 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag2O35638 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Stag2O35638 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag2O35638 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag2O35638 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag2O35638 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Stag2O35638 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Stag2O35638 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag2O35638 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Stag2O35638 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.24■□□□□ 0.67
Stag2O35638 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag2O35638 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag2O35638 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag2O35638 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.24■□□□□ 0.67
Stag2O35638 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag2O35638 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Stag2O35638 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.24■□□□□ 0.67
Stag2O35638 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag2O35638 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag2O35638 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag2O35638 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Stag2O35638 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stag2O35638 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Stag2O35638 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stag2O35638 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.23■□□□□ 0.67
Stag2O35638 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Stag2O35638 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.23■□□□□ 0.67
Stag2O35638 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stag2O35638 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stag2O35638 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Stag2O35638 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Stag2O35638 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.22■□□□□ 0.67
Stag2O35638 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Stag2O35638 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.22■□□□□ 0.67
Stag2O35638 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.22■□□□□ 0.67
Stag2O35638 Gm21362-201ENSMUST00000194272 928 ntBASIC19.22■□□□□ 0.67
Stag2O35638 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Stag2O35638 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag2O35638 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag2O35638 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Stag2O35638 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Stag2O35638 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.21■□□□□ 0.67
Stag2O35638 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Gm6623-201ENSMUST00000173570 544 ntBASIC19.21■□□□□ 0.67
Stag2O35638 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.21■□□□□ 0.67
Stag2O35638 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Stag2O35638 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Stag2O35638 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Gm7367-201ENSMUST00000057611 492 ntBASIC19.21■□□□□ 0.67
Stag2O35638 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Stag2O35638 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag2O35638 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Stag2O35638 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Stag2O35638 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Stag2O35638 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag2O35638 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag2O35638 Gm11950-201ENSMUST00000121615 838 ntBASIC19.2■□□□□ 0.66
Stag2O35638 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Stag2O35638 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Stag2O35638 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Stag2O35638 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Stag2O35638 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Stag2O35638 Gm18421-201ENSMUST00000204122 625 ntBASIC19.2■□□□□ 0.66
Stag2O35638 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag2O35638 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.2■□□□□ 0.66
Stag2O35638 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Stag2O35638 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.2■□□□□ 0.66
Stag2O35638 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag2O35638 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stag2O35638 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Stag2O35638 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Stag2O35638 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Stag2O35638 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Stag2O35638 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stag2O35638 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stag2O35638 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Stag2O35638 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms