Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ptch2O35595 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ptch2O35595 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ptch2O35595 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ptch2O35595 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Ptch2O35595 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ptch2O35595 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.22■□□□□ 0.35
Ptch2O35595 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.22■□□□□ 0.35
Ptch2O35595 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.22■□□□□ 0.35
Ptch2O35595 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.22■□□□□ 0.35
Ptch2O35595 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ptch2O35595 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Ptch2O35595 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ptch2O35595 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ptch2O35595 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ptch2O35595 Gm24589-201ENSMUST00000116692 94 ntBASIC17.21■□□□□ 0.35
Ptch2O35595 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.21■□□□□ 0.35
Ptch2O35595 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ptch2O35595 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ptch2O35595 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ptch2O35595 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ptch2O35595 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ptch2O35595 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptch2O35595 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptch2O35595 Gm13186-201ENSMUST00000118031 316 ntBASIC17.2■□□□□ 0.34
Ptch2O35595 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ptch2O35595 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.2■□□□□ 0.34
Ptch2O35595 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.2■□□□□ 0.34
Ptch2O35595 Gm18115-201ENSMUST00000221209 621 ntBASIC17.2■□□□□ 0.34
Ptch2O35595 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ptch2O35595 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ptch2O35595 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptch2O35595 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptch2O35595 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.2■□□□□ 0.34
Ptch2O35595 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.2■□□□□ 0.34
Ptch2O35595 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptch2O35595 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ptch2O35595 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptch2O35595 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptch2O35595 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ptch2O35595 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ptch2O35595 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptch2O35595 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.19■□□□□ 0.34
Ptch2O35595 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ptch2O35595 Gm34391-201ENSMUST00000203706 907 ntBASIC17.19■□□□□ 0.34
Ptch2O35595 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.19■□□□□ 0.34
Ptch2O35595 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptch2O35595 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptch2O35595 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ptch2O35595 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptch2O35595 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptch2O35595 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.19■□□□□ 0.34
Ptch2O35595 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptch2O35595 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptch2O35595 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ptch2O35595 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptch2O35595 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptch2O35595 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptch2O35595 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ptch2O35595 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptch2O35595 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptch2O35595 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptch2O35595 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.18■□□□□ 0.34
Ptch2O35595 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ptch2O35595 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ptch2O35595 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.18■□□□□ 0.34
Ptch2O35595 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ptch2O35595 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.18■□□□□ 0.34
Ptch2O35595 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptch2O35595 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ptch2O35595 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ptch2O35595 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms