Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.15□□□□□ -0.3
Tnfsf11O35235 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Tnfsf11O35235 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Tnfsf11O35235 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tnfsf11O35235 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tnfsf11O35235 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.15□□□□□ -0.31
Tnfsf11O35235 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.15□□□□□ -0.31
Tnfsf11O35235 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Gm2399-201ENSMUST00000104944 225 ntBASIC13.14□□□□□ -0.31
Tnfsf11O35235 Gm13401-201ENSMUST00000117074 291 ntBASIC13.14□□□□□ -0.31
Tnfsf11O35235 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.14□□□□□ -0.31
Tnfsf11O35235 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tnfsf11O35235 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Gm10033-202ENSMUST00000211874 928 ntBASIC13.13□□□□□ -0.31
Tnfsf11O35235 Gm18671-201ENSMUST00000214826 683 ntBASIC13.13□□□□□ -0.31
Tnfsf11O35235 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Zfp783-201ENSMUST00000095946 670 ntBASIC13.13□□□□□ -0.31
Tnfsf11O35235 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.13□□□□□ -0.31
Tnfsf11O35235 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.13□□□□□ -0.31
Tnfsf11O35235 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfsf11O35235 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.12□□□□□ -0.31
Tnfsf11O35235 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tnfsf11O35235 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfsf11O35235 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.12□□□□□ -0.31
Tnfsf11O35235 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms