Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trove2O08848 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.29■□□□□ 0.36
Trove2O08848 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Trove2O08848 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trove2O08848 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trove2O08848 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trove2O08848 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.28■□□□□ 0.36
Trove2O08848 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trove2O08848 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trove2O08848 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trove2O08848 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trove2O08848 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trove2O08848 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trove2O08848 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trove2O08848 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.28■□□□□ 0.36
Trove2O08848 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trove2O08848 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.28■□□□□ 0.36
Trove2O08848 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trove2O08848 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trove2O08848 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trove2O08848 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trove2O08848 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.28■□□□□ 0.36
Trove2O08848 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trove2O08848 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.28■□□□□ 0.36
Trove2O08848 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.28■□□□□ 0.36
Trove2O08848 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.28■□□□□ 0.36
Trove2O08848 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trove2O08848 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trove2O08848 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trove2O08848 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trove2O08848 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trove2O08848 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trove2O08848 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trove2O08848 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Trove2O08848 Gm11927-201ENSMUST00000118472 759 ntBASIC17.27■□□□□ 0.36
Trove2O08848 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trove2O08848 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trove2O08848 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trove2O08848 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trove2O08848 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trove2O08848 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trove2O08848 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trove2O08848 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trove2O08848 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trove2O08848 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trove2O08848 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trove2O08848 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trove2O08848 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Mir8112-201ENSMUST00000184382 131 ntBASIC17.26■□□□□ 0.35
Trove2O08848 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.26■□□□□ 0.35
Trove2O08848 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Trove2O08848 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.26■□□□□ 0.35
Trove2O08848 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trove2O08848 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Trove2O08848 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.25■□□□□ 0.35
Trove2O08848 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.25■□□□□ 0.35
Trove2O08848 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trove2O08848 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trove2O08848 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Trove2O08848 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.25■□□□□ 0.35
Trove2O08848 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Trove2O08848 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.25■□□□□ 0.35
Trove2O08848 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trove2O08848 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trove2O08848 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trove2O08848 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trove2O08848 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trove2O08848 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trove2O08848 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trove2O08848 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms